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Cluster: HRGMv2_1611_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1611_5 HRGMv2_1611_5_81 86981 87907 - CE7
TC HRGMv2_1611_5 HRGMv2_1611_5_82 88039 88866 - 3.A.1.5.27
TC HRGMv2_1611_5 HRGMv2_1611_5_83 88867 90882 - 3.A.1.5.25
TC HRGMv2_1611_5 HRGMv2_1611_5_84 90886 91842 - 3.A.1.5.38
TC HRGMv2_1611_5 HRGMv2_1611_5_85 92000 93613 - 3.A.1.5.27
pfam HRGMv2_1611_5 HRGMv2_1611_5_86 93979 95919 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1611_5 HRGMv2_1611_5_87 95926 98229 - 2.A.66.4.4
Gene ID: HRGMv2_1611_5_81
Type: CAZyme
Location: 86981 - 87907 (-)
Gene ID: HRGMv2_1611_5_82
Type: TC
Location: 88039 - 88866 (-)
Gene ID: HRGMv2_1611_5_83
Type: TC
Location: 88867 - 90882 (-)
Gene ID: HRGMv2_1611_5_84
Type: TC
Location: 90886 - 91842 (-)
Gene ID: HRGMv2_1611_5_85
Type: TC
Location: 92000 - 93613 (-)
Gene ID: HRGMv2_1611_5_86
Type: pfam
Location: 93979 - 95919 (-)
Gene ID: HRGMv2_1611_5_87
Type: TC
Location: 95926 - 98229 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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