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Cluster: HRGMv2_1611_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1611_5 HRGMv2_1611_5_62 63123 64856 - GH13_30
STP HRGMv2_1611_5 HRGMv2_1611_5_63 65788 66534 - STAS
STP HRGMv2_1611_5 HRGMv2_1611_5_64 66616 68961 - GAF | SpoIIE
TC HRGMv2_1611_5 HRGMv2_1611_5_65 69704 70732 - 3.A.1.5.36
TC HRGMv2_1611_5 HRGMv2_1611_5_66 70733 71824 - 3.A.1.5.34
TC HRGMv2_1611_5 HRGMv2_1611_5_67 71827 72762 - 3.A.1.5.11
TC HRGMv2_1611_5 HRGMv2_1611_5_68 72777 73814 - 3.A.1.5.37
TC HRGMv2_1611_5 HRGMv2_1611_5_69 73971 75647 - 3.A.1.5.35
Gene ID: HRGMv2_1611_5_62
Type: CAZyme
Location: 63123 - 64856 (-)
Gene ID: HRGMv2_1611_5_63
Type: STP
Location: 65788 - 66534 (-)
Gene ID: HRGMv2_1611_5_64
Type: STP
Location: 66616 - 68961 (-)
Gene ID: HRGMv2_1611_5_65
Type: TC
Location: 69704 - 70732 (-)
Gene ID: HRGMv2_1611_5_66
Type: TC
Location: 70733 - 71824 (-)
Gene ID: HRGMv2_1611_5_67
Type: TC
Location: 71827 - 72762 (-)
Gene ID: HRGMv2_1611_5_68
Type: TC
Location: 72777 - 73814 (-)
Gene ID: HRGMv2_1611_5_69
Type: TC
Location: 73971 - 75647 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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