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Cluster: HRGMv2_1611_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1611_3 HRGMv2_1611_3_80 81274 81717 + 4.A.6.1.16
pfam HRGMv2_1611_3 HRGMv2_1611_3_81 81717 81998 + YajC
TC HRGMv2_1611_3 HRGMv2_1611_3_82 82035 82517 + 4.A.6.1.4
TC HRGMv2_1611_3 HRGMv2_1611_3_83 82608 83408 + 4.A.6.1.4
TC HRGMv2_1611_3 HRGMv2_1611_3_84 83398 84480 + 4.A.6.1.4
TF HRGMv2_1611_3 HRGMv2_1611_3_85 84666 85397 + GntR
STP HRGMv2_1611_3 HRGMv2_1611_3_86 85512 86678 + SIS | SIS
CAZyme HRGMv2_1611_3 HRGMv2_1611_3_87 86797 87966 + CE9
Gene ID: HRGMv2_1611_3_80
Type: TC
Location: 81274 - 81717 (+)
Gene ID: HRGMv2_1611_3_81
Type: pfam
Location: 81717 - 81998 (+)
Gene ID: HRGMv2_1611_3_82
Type: TC
Location: 82035 - 82517 (+)
Gene ID: HRGMv2_1611_3_83
Type: TC
Location: 82608 - 83408 (+)
Gene ID: HRGMv2_1611_3_84
Type: TC
Location: 83398 - 84480 (+)
Gene ID: HRGMv2_1611_3_85
Type: TF
Location: 84666 - 85397 (+)
Gene ID: HRGMv2_1611_3_86
Type: STP
Location: 85512 - 86678 (+)
Gene ID: HRGMv2_1611_3_87
Type: CAZyme
Location: 86797 - 87966 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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