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Cluster: HRGMv2_1610_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1610_32 HRGMv2_1610_32_5 4018 4356 - 4.A.3.1.2
TF HRGMv2_1610_32 HRGMv2_1610_32_6 4571 5605 - LacI
TC HRGMv2_1610_32 HRGMv2_1610_32_7 5932 7707 + 4.A.3.1.1
CAZyme HRGMv2_1610_32 HRGMv2_1610_32_8 7774 9213 + GH1
TF HRGMv2_1610_32 HRGMv2_1610_32_9 9402 10439 - LacI
CAZyme HRGMv2_1610_32 HRGMv2_1610_32_10 10781 12223 + GH1
TC HRGMv2_1610_32 HRGMv2_1610_32_11 12400 14160 + 4.A.3.1.1
TF HRGMv2_1610_32 HRGMv2_1610_32_12 14418 15419 - LacI
TC HRGMv2_1610_32 HRGMv2_1610_32_13 15704 17482 + 4.A.3.1.1
CAZyme HRGMv2_1610_32 HRGMv2_1610_32_14 17558 18979 + GH1
Gene ID: HRGMv2_1610_32_5
Type: TC
Location: 4018 - 4356 (-)
Gene ID: HRGMv2_1610_32_6
Type: TF
Location: 4571 - 5605 (-)
Gene ID: HRGMv2_1610_32_7
Type: TC
Location: 5932 - 7707 (+)
Gene ID: HRGMv2_1610_32_8
Type: CAZyme
Location: 7774 - 9213 (+)
Gene ID: HRGMv2_1610_32_9
Type: TF
Location: 9402 - 10439 (-)
Gene ID: HRGMv2_1610_32_10
Type: CAZyme
Location: 10781 - 12223 (+)
Gene ID: HRGMv2_1610_32_11
Type: TC
Location: 12400 - 14160 (+)
Gene ID: HRGMv2_1610_32_12
Type: TF
Location: 14418 - 15419 (-)
Gene ID: HRGMv2_1610_32_13
Type: TC
Location: 15704 - 17482 (+)
Gene ID: HRGMv2_1610_32_14
Type: CAZyme
Location: 17558 - 18979 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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