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Cluster: HRGMv2_1610_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1610_22 HRGMv2_1610_22_11 9909 10352 + 4.A.6.1.16
pfam HRGMv2_1610_22 HRGMv2_1610_22_12 10352 10633 + YajC
TC HRGMv2_1610_22 HRGMv2_1610_22_13 10670 11152 + 4.A.6.1.4
TC HRGMv2_1610_22 HRGMv2_1610_22_14 11243 12043 + 4.A.6.1.4
TC HRGMv2_1610_22 HRGMv2_1610_22_15 12033 13115 + 4.A.6.1.4
TF HRGMv2_1610_22 HRGMv2_1610_22_16 13301 14032 + GntR
STP HRGMv2_1610_22 HRGMv2_1610_22_17 14147 15313 + SIS | SIS
CAZyme HRGMv2_1610_22 HRGMv2_1610_22_18 15431 16600 + CE9
Gene ID: HRGMv2_1610_22_11
Type: TC
Location: 9909 - 10352 (+)
Gene ID: HRGMv2_1610_22_12
Type: pfam
Location: 10352 - 10633 (+)
Gene ID: HRGMv2_1610_22_13
Type: TC
Location: 10670 - 11152 (+)
Gene ID: HRGMv2_1610_22_14
Type: TC
Location: 11243 - 12043 (+)
Gene ID: HRGMv2_1610_22_15
Type: TC
Location: 12033 - 13115 (+)
Gene ID: HRGMv2_1610_22_16
Type: TF
Location: 13301 - 14032 (+)
Gene ID: HRGMv2_1610_22_17
Type: STP
Location: 14147 - 15313 (+)
Gene ID: HRGMv2_1610_22_18
Type: CAZyme
Location: 15431 - 16600 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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