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Cluster: HRGMv2_1609_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1609_7 HRGMv2_1609_7_48 57610 59076 - 2.A.66.2.23
pfam HRGMv2_1609_7 HRGMv2_1609_7_49 59161 60108 - ATPgrasp_TupA
pfam HRGMv2_1609_7 HRGMv2_1609_7_50 60252 61340 - EpsG
CAZyme HRGMv2_1609_7 HRGMv2_1609_7_51 61337 62440 - GT4
pfam HRGMv2_1609_7 HRGMv2_1609_7_52 62437 63384 - C5-epim_C
CAZyme HRGMv2_1609_7 HRGMv2_1609_7_53 63384 64676 - GT4
pfam HRGMv2_1609_7 HRGMv2_1609_7_54 64682 65953 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1609_7 HRGMv2_1609_7_55 65997 66914 - GT2
TC HRGMv2_1609_7 HRGMv2_1609_7_56 66918 67682 - 9.B.18.1.2
Gene ID: HRGMv2_1609_7_48
Type: TC
Location: 57610 - 59076 (-)
Gene ID: HRGMv2_1609_7_49
Type: pfam
Location: 59161 - 60108 (-)
Gene ID: HRGMv2_1609_7_50
Type: pfam
Location: 60252 - 61340 (-)
Gene ID: HRGMv2_1609_7_51
Type: CAZyme
Location: 61337 - 62440 (-)
Gene ID: HRGMv2_1609_7_52
Type: pfam
Location: 62437 - 63384 (-)
Gene ID: HRGMv2_1609_7_53
Type: CAZyme
Location: 63384 - 64676 (-)
Gene ID: HRGMv2_1609_7_54
Type: pfam
Location: 64682 - 65953 (-)
Gene ID: HRGMv2_1609_7_55
Type: CAZyme
Location: 65997 - 66914 (-)
Gene ID: HRGMv2_1609_7_56
Type: TC
Location: 66918 - 67682 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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