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Cluster: HRGMv2_1609_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1609_3 HRGMv2_1609_3_86 103111 104199 - 3.D.1.4.2
pfam HRGMv2_1609_3 HRGMv2_1609_3_87 104205 104921 - Complex1_30kDa
TC HRGMv2_1609_3 HRGMv2_1609_3_88 104921 105514 - 3.D.1.4.2
TC HRGMv2_1609_3 HRGMv2_1609_3_89 105527 108409 - 3.D.1.4.2
TF HRGMv2_1609_3 HRGMv2_1609_3_90 108697 109092 - 0039939
STP HRGMv2_1609_3 HRGMv2_1609_3_91 109542 111572 - Pyr_redox_2
TC HRGMv2_1609_3 HRGMv2_1609_3_92 112527 114089 + 4.A.1.1.7
NULL(UNKNOWN) HRGMv2_1609_3 HRGMv2_1609_3_93 114135 114404 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1609_3 HRGMv2_1609_3_94 114424 115752 + GH4
Gene ID: HRGMv2_1609_3_86
Type: TC
Location: 103111 - 104199 (-)
Gene ID: HRGMv2_1609_3_87
Type: pfam
Location: 104205 - 104921 (-)
Gene ID: HRGMv2_1609_3_88
Type: TC
Location: 104921 - 105514 (-)
Gene ID: HRGMv2_1609_3_89
Type: TC
Location: 105527 - 108409 (-)
Gene ID: HRGMv2_1609_3_90
Type: TF
Location: 108697 - 109092 (-)
Gene ID: HRGMv2_1609_3_91
Type: STP
Location: 109542 - 111572 (-)
Gene ID: HRGMv2_1609_3_92
Type: TC
Location: 112527 - 114089 (+)
Gene ID: HRGMv2_1609_3_93
Type:
Location: 114135 - 114404 (+)
Gene ID: HRGMv2_1609_3_94
Type: CAZyme
Location: 114424 - 115752 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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