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Cluster: HRGMv2_1609_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1609_31 HRGMv2_1609_31_4 2574 3500 - CE7
TC HRGMv2_1609_31 HRGMv2_1609_31_5 3632 4459 - 3.A.1.5.27
TC HRGMv2_1609_31 HRGMv2_1609_31_6 4460 6475 - 3.A.1.5.25
TC HRGMv2_1609_31 HRGMv2_1609_31_7 6479 7435 - 3.A.1.5.38
TC HRGMv2_1609_31 HRGMv2_1609_31_8 7593 9206 - 3.A.1.5.27
pfam HRGMv2_1609_31 HRGMv2_1609_31_9 9572 11512 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1609_31 HRGMv2_1609_31_10 11519 13201 - 2.A.66.4.4
Gene ID: HRGMv2_1609_31_4
Type: CAZyme
Location: 2574 - 3500 (-)
Gene ID: HRGMv2_1609_31_5
Type: TC
Location: 3632 - 4459 (-)
Gene ID: HRGMv2_1609_31_6
Type: TC
Location: 4460 - 6475 (-)
Gene ID: HRGMv2_1609_31_7
Type: TC
Location: 6479 - 7435 (-)
Gene ID: HRGMv2_1609_31_8
Type: TC
Location: 7593 - 9206 (-)
Gene ID: HRGMv2_1609_31_9
Type: pfam
Location: 9572 - 11512 (-)
Gene ID: HRGMv2_1609_31_10
Type: TC
Location: 11519 - 13201 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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