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Cluster: HRGMv2_1609_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1609_11 HRGMv2_1609_11_31 38225 38563 - 4.A.3.1.2
TF HRGMv2_1609_11 HRGMv2_1609_11_32 38778 39782 - LacI
TC HRGMv2_1609_11 HRGMv2_1609_11_33 40140 41915 + 4.A.3.1.1
CAZyme HRGMv2_1609_11 HRGMv2_1609_11_34 41982 43421 + GH1
TF HRGMv2_1609_11 HRGMv2_1609_11_35 43782 44792 - LacI
TC HRGMv2_1609_11 HRGMv2_1609_11_36 45069 46847 + 4.A.3.1.1
CAZyme HRGMv2_1609_11 HRGMv2_1609_11_37 46923 48344 + GH1
TF HRGMv2_1609_11 HRGMv2_1609_11_38 48857 49621 - HTH_DeoR
sulfatase HRGMv2_1609_11 HRGMv2_1609_11_39 49828 50880 + S1_4
TC HRGMv2_1609_11 HRGMv2_1609_11_40 51207 51689 - 4.A.6.1.3
Gene ID: HRGMv2_1609_11_31
Type: TC
Location: 38225 - 38563 (-)
Gene ID: HRGMv2_1609_11_32
Type: TF
Location: 38778 - 39782 (-)
Gene ID: HRGMv2_1609_11_33
Type: TC
Location: 40140 - 41915 (+)
Gene ID: HRGMv2_1609_11_34
Type: CAZyme
Location: 41982 - 43421 (+)
Gene ID: HRGMv2_1609_11_35
Type: TF
Location: 43782 - 44792 (-)
Gene ID: HRGMv2_1609_11_36
Type: TC
Location: 45069 - 46847 (+)
Gene ID: HRGMv2_1609_11_37
Type: CAZyme
Location: 46923 - 48344 (+)
Gene ID: HRGMv2_1609_11_38
Type: TF
Location: 48857 - 49621 (-)
Gene ID: HRGMv2_1609_11_39
Type: sulfatase
Location: 49828 - 50880 (+)
Gene ID: HRGMv2_1609_11_40
Type: TC
Location: 51207 - 51689 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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