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Cluster: HRGMv2_1609_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1609_8 HRGMv2_1609_8_7 6297 7466 - CE9
STP HRGMv2_1609_8 HRGMv2_1609_8_8 7584 8750 - SIS | SIS
TF HRGMv2_1609_8 HRGMv2_1609_8_9 8865 9596 - GntR
TC HRGMv2_1609_8 HRGMv2_1609_8_10 9782 10864 - 4.A.6.1.4
TC HRGMv2_1609_8 HRGMv2_1609_8_11 10854 11654 - 4.A.6.1.4
TC HRGMv2_1609_8 HRGMv2_1609_8_12 11745 12227 - 4.A.6.1.4
pfam HRGMv2_1609_8 HRGMv2_1609_8_13 12264 12545 - YajC
TC HRGMv2_1609_8 HRGMv2_1609_8_14 12545 12988 - 4.A.6.1.16
Gene ID: HRGMv2_1609_8_7
Type: CAZyme
Location: 6297 - 7466 (-)
Gene ID: HRGMv2_1609_8_8
Type: STP
Location: 7584 - 8750 (-)
Gene ID: HRGMv2_1609_8_9
Type: TF
Location: 8865 - 9596 (-)
Gene ID: HRGMv2_1609_8_10
Type: TC
Location: 9782 - 10864 (-)
Gene ID: HRGMv2_1609_8_11
Type: TC
Location: 10854 - 11654 (-)
Gene ID: HRGMv2_1609_8_12
Type: TC
Location: 11745 - 12227 (-)
Gene ID: HRGMv2_1609_8_13
Type: pfam
Location: 12264 - 12545 (-)
Gene ID: HRGMv2_1609_8_14
Type: TC
Location: 12545 - 12988 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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