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Cluster: HRGMv2_1609_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1609_1 HRGMv2_1609_1_59 63492 64286 - 3.A.1.34.1
TC HRGMv2_1609_1 HRGMv2_1609_1_60 64279 65202 - 3.A.1.34.1
TC HRGMv2_1609_1 HRGMv2_1609_1_61 65407 66387 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1609_1 HRGMv2_1609_1_62 66548 67333 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1609_1 HRGMv2_1609_1_63 67583 68986 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1609_1 HRGMv2_1609_1_64 69167 69808 - 4.A.1.2.6
peptidase HRGMv2_1609_1 HRGMv2_1609_1_65 69977 70876 + S09.UPW
NULL(UNKNOWN) HRGMv2_1609_1 HRGMv2_1609_1_66 70924 71244 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1609_1 HRGMv2_1609_1_67 71366 73726 + 9.A.8.1.6
TC HRGMv2_1609_1 HRGMv2_1609_1_68 73851 75047 + 2.A.1.2.18
CAZyme HRGMv2_1609_1 HRGMv2_1609_1_69 75201 76577 + GH13_20
Gene ID: HRGMv2_1609_1_59
Type: TC
Location: 63492 - 64286 (-)
Gene ID: HRGMv2_1609_1_60
Type: TC
Location: 64279 - 65202 (-)
Gene ID: HRGMv2_1609_1_61
Type: TC
Location: 65407 - 66387 (-)
Gene ID: HRGMv2_1609_1_62
Type:
Location: 66548 - 67333 (-)
Gene ID: HRGMv2_1609_1_63
Type: pfam
Location: 67583 - 68986 (-)
Gene ID: HRGMv2_1609_1_64
Type: TC
Location: 69167 - 69808 (-)
Gene ID: HRGMv2_1609_1_65
Type: peptidase
Location: 69977 - 70876 (+)
Gene ID: HRGMv2_1609_1_66
Type:
Location: 70924 - 71244 (+)
Gene ID: HRGMv2_1609_1_67
Type: TC
Location: 71366 - 73726 (+)
Gene ID: HRGMv2_1609_1_68
Type: TC
Location: 73851 - 75047 (+)
Gene ID: HRGMv2_1609_1_69
Type: CAZyme
Location: 75201 - 76577 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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