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Cluster: HRGMv2_1608_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1608_7 HRGMv2_1608_7_38 45302 46471 - CE9
STP HRGMv2_1608_7 HRGMv2_1608_7_39 46589 47755 - SIS | SIS
TF HRGMv2_1608_7 HRGMv2_1608_7_40 47870 48601 - GntR
TC HRGMv2_1608_7 HRGMv2_1608_7_41 48787 49869 - 4.A.6.1.4
TC HRGMv2_1608_7 HRGMv2_1608_7_42 49859 50659 - 4.A.6.1.4
TC HRGMv2_1608_7 HRGMv2_1608_7_43 50750 51232 - 4.A.6.1.4
pfam HRGMv2_1608_7 HRGMv2_1608_7_44 51269 51550 - YajC
TC HRGMv2_1608_7 HRGMv2_1608_7_45 51550 51993 - 4.A.6.1.16
Gene ID: HRGMv2_1608_7_38
Type: CAZyme
Location: 45302 - 46471 (-)
Gene ID: HRGMv2_1608_7_39
Type: STP
Location: 46589 - 47755 (-)
Gene ID: HRGMv2_1608_7_40
Type: TF
Location: 47870 - 48601 (-)
Gene ID: HRGMv2_1608_7_41
Type: TC
Location: 48787 - 49869 (-)
Gene ID: HRGMv2_1608_7_42
Type: TC
Location: 49859 - 50659 (-)
Gene ID: HRGMv2_1608_7_43
Type: TC
Location: 50750 - 51232 (-)
Gene ID: HRGMv2_1608_7_44
Type: pfam
Location: 51269 - 51550 (-)
Gene ID: HRGMv2_1608_7_45
Type: TC
Location: 51550 - 51993 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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