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Cluster: HRGMv2_1608_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1608_7 HRGMv2_1608_7_24 28063 28401 - 4.A.3.1.2
TF HRGMv2_1608_7 HRGMv2_1608_7_25 28616 29620 - LacI
TC HRGMv2_1608_7 HRGMv2_1608_7_26 29978 31753 + 4.A.3.1.1
CAZyme HRGMv2_1608_7 HRGMv2_1608_7_27 31820 33259 + GH1
TF HRGMv2_1608_7 HRGMv2_1608_7_28 33534 34544 - LacI
TC HRGMv2_1608_7 HRGMv2_1608_7_29 34820 36598 + 4.A.3.1.1
CAZyme HRGMv2_1608_7 HRGMv2_1608_7_30 36674 38095 + GH1
TF HRGMv2_1608_7 HRGMv2_1608_7_31 38607 39371 - HTH_DeoR
sulfatase HRGMv2_1608_7 HRGMv2_1608_7_32 39578 40630 + S1_4
TC HRGMv2_1608_7 HRGMv2_1608_7_33 40957 41439 - 4.A.6.1.3
Gene ID: HRGMv2_1608_7_24
Type: TC
Location: 28063 - 28401 (-)
Gene ID: HRGMv2_1608_7_25
Type: TF
Location: 28616 - 29620 (-)
Gene ID: HRGMv2_1608_7_26
Type: TC
Location: 29978 - 31753 (+)
Gene ID: HRGMv2_1608_7_27
Type: CAZyme
Location: 31820 - 33259 (+)
Gene ID: HRGMv2_1608_7_28
Type: TF
Location: 33534 - 34544 (-)
Gene ID: HRGMv2_1608_7_29
Type: TC
Location: 34820 - 36598 (+)
Gene ID: HRGMv2_1608_7_30
Type: CAZyme
Location: 36674 - 38095 (+)
Gene ID: HRGMv2_1608_7_31
Type: TF
Location: 38607 - 39371 (-)
Gene ID: HRGMv2_1608_7_32
Type: sulfatase
Location: 39578 - 40630 (+)
Gene ID: HRGMv2_1608_7_33
Type: TC
Location: 40957 - 41439 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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