dbCAN Logo

Cluster: HRGMv2_1608_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1608_4 HRGMv2_1608_4_65 96128 98581 - 4.A.1.1.8
TF HRGMv2_1608_4 HRGMv2_1608_4_66 98809 99528 + GntR
TC HRGMv2_1608_4 HRGMv2_1608_4_67 99835 101151 + 3.A.1.1.45
TC HRGMv2_1608_4 HRGMv2_1608_4_68 101241 102095 + 3.A.1.1.45
TC HRGMv2_1608_4 HRGMv2_1608_4_69 102095 102934 + 3.A.1.1.45
TC HRGMv2_1608_4 HRGMv2_1608_4_70 103002 104201 + 3.A.1.1.22
CAZyme HRGMv2_1608_4 HRGMv2_1608_4_71 104657 106924 - GT35
CAZyme HRGMv2_1608_4 HRGMv2_1608_4_72 107054 108559 - GH77
Gene ID: HRGMv2_1608_4_65
Type: TC
Location: 96128 - 98581 (-)
Gene ID: HRGMv2_1608_4_66
Type: TF
Location: 98809 - 99528 (+)
Gene ID: HRGMv2_1608_4_67
Type: TC
Location: 99835 - 101151 (+)
Gene ID: HRGMv2_1608_4_68
Type: TC
Location: 101241 - 102095 (+)
Gene ID: HRGMv2_1608_4_69
Type: TC
Location: 102095 - 102934 (+)
Gene ID: HRGMv2_1608_4_70
Type: TC
Location: 103002 - 104201 (+)
Gene ID: HRGMv2_1608_4_71
Type: CAZyme
Location: 104657 - 106924 (-)
Gene ID: HRGMv2_1608_4_72
Type: CAZyme
Location: 107054 - 108559 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List