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Cluster: HRGMv2_1608_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1608_2 HRGMv2_1608_2_124 135384 136760 - GH13_20
TC HRGMv2_1608_2 HRGMv2_1608_2_125 136915 138111 - 2.A.1.2.18
TC HRGMv2_1608_2 HRGMv2_1608_2_126 138233 140593 - 9.A.8.1.6
peptidase HRGMv2_1608_2 HRGMv2_1608_2_127 140778 141680 - S09.UPW
TC HRGMv2_1608_2 HRGMv2_1608_2_128 141925 142488 + 4.A.1.2.6
pfam HRGMv2_1608_2 HRGMv2_1608_2_129 142670 144073 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1608_2 HRGMv2_1608_2_130 144330 145112 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1608_2 HRGMv2_1608_2_131 145273 146253 + 3.A.1.34.1
TC HRGMv2_1608_2 HRGMv2_1608_2_132 146458 147381 + 3.A.1.34.1
TC HRGMv2_1608_2 HRGMv2_1608_2_133 147374 148168 + 3.A.1.34.1
Gene ID: HRGMv2_1608_2_124
Type: CAZyme
Location: 135384 - 136760 (-)
Gene ID: HRGMv2_1608_2_125
Type: TC
Location: 136915 - 138111 (-)
Gene ID: HRGMv2_1608_2_126
Type: TC
Location: 138233 - 140593 (-)
Gene ID: HRGMv2_1608_2_127
Type: peptidase
Location: 140778 - 141680 (-)
Gene ID: HRGMv2_1608_2_128
Type: TC
Location: 141925 - 142488 (+)
Gene ID: HRGMv2_1608_2_129
Type: pfam
Location: 142670 - 144073 (+)
Gene ID: HRGMv2_1608_2_130
Type:
Location: 144330 - 145112 (+)
Gene ID: HRGMv2_1608_2_131
Type: TC
Location: 145273 - 146253 (+)
Gene ID: HRGMv2_1608_2_132
Type: TC
Location: 146458 - 147381 (+)
Gene ID: HRGMv2_1608_2_133
Type: TC
Location: 147374 - 148168 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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