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Cluster: HRGMv2_1607_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1607_7 HRGMv2_1607_7_37 35227 35721 + 4.A.6.1.16
sulfatase HRGMv2_1607_7 HRGMv2_1607_7_38 35944 36996 - S1_4
TF HRGMv2_1607_7 HRGMv2_1607_7_39 37203 37967 + HTH_DeoR
CAZyme HRGMv2_1607_7 HRGMv2_1607_7_40 38164 39585 - GH1
TC HRGMv2_1607_7 HRGMv2_1607_7_41 39662 41440 - 4.A.3.1.1
TF HRGMv2_1607_7 HRGMv2_1607_7_42 41716 42726 + LacI
CAZyme HRGMv2_1607_7 HRGMv2_1607_7_43 42925 44364 - GH1
TC HRGMv2_1607_7 HRGMv2_1607_7_44 44431 46206 - 4.A.3.1.1
TF HRGMv2_1607_7 HRGMv2_1607_7_45 46564 47568 + LacI
TC HRGMv2_1607_7 HRGMv2_1607_7_46 47783 48121 + 4.A.3.1.2
Gene ID: HRGMv2_1607_7_37
Type: TC
Location: 35227 - 35721 (+)
Gene ID: HRGMv2_1607_7_38
Type: sulfatase
Location: 35944 - 36996 (-)
Gene ID: HRGMv2_1607_7_39
Type: TF
Location: 37203 - 37967 (+)
Gene ID: HRGMv2_1607_7_40
Type: CAZyme
Location: 38164 - 39585 (-)
Gene ID: HRGMv2_1607_7_41
Type: TC
Location: 39662 - 41440 (-)
Gene ID: HRGMv2_1607_7_42
Type: TF
Location: 41716 - 42726 (+)
Gene ID: HRGMv2_1607_7_43
Type: CAZyme
Location: 42925 - 44364 (-)
Gene ID: HRGMv2_1607_7_44
Type: TC
Location: 44431 - 46206 (-)
Gene ID: HRGMv2_1607_7_45
Type: TF
Location: 46564 - 47568 (+)
Gene ID: HRGMv2_1607_7_46
Type: TC
Location: 47783 - 48121 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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