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Cluster: HRGMv2_1607_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1607_39 HRGMv2_1607_39_6 4820 5908 - 3.D.1.4.2
pfam HRGMv2_1607_39 HRGMv2_1607_39_7 5914 6630 - Complex1_30kDa
TC HRGMv2_1607_39 HRGMv2_1607_39_8 6630 7205 - 3.D.1.4.2
TC HRGMv2_1607_39 HRGMv2_1607_39_9 7218 10100 - 3.D.1.4.2
TF HRGMv2_1607_39 HRGMv2_1607_39_10 10388 10783 - 0039939
STP HRGMv2_1607_39 HRGMv2_1607_39_11 11233 13263 - Pyr_redox_2
TC HRGMv2_1607_39 HRGMv2_1607_39_12 14296 15858 + 4.A.1.1.16
NULL(UNKNOWN) HRGMv2_1607_39 HRGMv2_1607_39_13 15897 16166 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1607_39 HRGMv2_1607_39_14 16186 17514 + GH4
Gene ID: HRGMv2_1607_39_6
Type: TC
Location: 4820 - 5908 (-)
Gene ID: HRGMv2_1607_39_7
Type: pfam
Location: 5914 - 6630 (-)
Gene ID: HRGMv2_1607_39_8
Type: TC
Location: 6630 - 7205 (-)
Gene ID: HRGMv2_1607_39_9
Type: TC
Location: 7218 - 10100 (-)
Gene ID: HRGMv2_1607_39_10
Type: TF
Location: 10388 - 10783 (-)
Gene ID: HRGMv2_1607_39_11
Type: STP
Location: 11233 - 13263 (-)
Gene ID: HRGMv2_1607_39_12
Type: TC
Location: 14296 - 15858 (+)
Gene ID: HRGMv2_1607_39_13
Type:
Location: 15897 - 16166 (+)
Gene ID: HRGMv2_1607_39_14
Type: CAZyme
Location: 16186 - 17514 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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