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Cluster: HRGMv2_1607_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1607_28 HRGMv2_1607_28_3 3703 5385 + 2.A.66.4.4
pfam HRGMv2_1607_28 HRGMv2_1607_28_4 5392 7332 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1607_28 HRGMv2_1607_28_5 7698 9311 + 3.A.1.5.27
TC HRGMv2_1607_28 HRGMv2_1607_28_6 9469 10425 + 3.A.1.5.38
TC HRGMv2_1607_28 HRGMv2_1607_28_7 10429 12444 + 3.A.1.5.25
TC HRGMv2_1607_28 HRGMv2_1607_28_8 12445 13272 + 3.A.1.5.27
CAZyme HRGMv2_1607_28 HRGMv2_1607_28_9 13446 14330 + CE7
Gene ID: HRGMv2_1607_28_3
Type: TC
Location: 3703 - 5385 (+)
Gene ID: HRGMv2_1607_28_4
Type: pfam
Location: 5392 - 7332 (+)
Gene ID: HRGMv2_1607_28_5
Type: TC
Location: 7698 - 9311 (+)
Gene ID: HRGMv2_1607_28_6
Type: TC
Location: 9469 - 10425 (+)
Gene ID: HRGMv2_1607_28_7
Type: TC
Location: 10429 - 12444 (+)
Gene ID: HRGMv2_1607_28_8
Type: TC
Location: 12445 - 13272 (+)
Gene ID: HRGMv2_1607_28_9
Type: CAZyme
Location: 13446 - 14330 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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