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Cluster: HRGMv2_1607_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1607_19 HRGMv2_1607_19_11 14869 17319 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1607_19 HRGMv2_1607_19_12 17341 17460 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1607_19 HRGMv2_1607_19_13 17543 18262 + GntR
TC HRGMv2_1607_19 HRGMv2_1607_19_14 18569 19885 + 3.A.1.1.45
TC HRGMv2_1607_19 HRGMv2_1607_19_15 19973 20827 + 3.A.1.1.45
TC HRGMv2_1607_19 HRGMv2_1607_19_16 20827 21666 + 3.A.1.1.45
TC HRGMv2_1607_19 HRGMv2_1607_19_17 21735 22934 + 3.A.1.1.22
CAZyme HRGMv2_1607_19 HRGMv2_1607_19_18 23390 25657 - GT35
CAZyme HRGMv2_1607_19 HRGMv2_1607_19_19 25785 27290 - GH77
Gene ID: HRGMv2_1607_19_11
Type: TC
Location: 14869 - 17319 (-)
Gene ID: HRGMv2_1607_19_12
Type:
Location: 17341 - 17460 (+)
Gene ID: HRGMv2_1607_19_13
Type: TF
Location: 17543 - 18262 (+)
Gene ID: HRGMv2_1607_19_14
Type: TC
Location: 18569 - 19885 (+)
Gene ID: HRGMv2_1607_19_15
Type: TC
Location: 19973 - 20827 (+)
Gene ID: HRGMv2_1607_19_16
Type: TC
Location: 20827 - 21666 (+)
Gene ID: HRGMv2_1607_19_17
Type: TC
Location: 21735 - 22934 (+)
Gene ID: HRGMv2_1607_19_18
Type: CAZyme
Location: 23390 - 25657 (-)
Gene ID: HRGMv2_1607_19_19
Type: CAZyme
Location: 25785 - 27290 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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