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Cluster: HRGMv2_1606_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1606_11 HRGMv2_1606_11_64 69151 70320 - CE9
STP HRGMv2_1606_11 HRGMv2_1606_11_65 70439 71605 - SIS | SIS
TF HRGMv2_1606_11 HRGMv2_1606_11_66 71720 72451 - GntR
TC HRGMv2_1606_11 HRGMv2_1606_11_67 72636 73718 - 4.A.6.1.4
TC HRGMv2_1606_11 HRGMv2_1606_11_68 73708 74508 - 4.A.6.1.4
TC HRGMv2_1606_11 HRGMv2_1606_11_69 74599 75081 - 4.A.6.1.4
pfam HRGMv2_1606_11 HRGMv2_1606_11_70 75118 75399 - YajC
TC HRGMv2_1606_11 HRGMv2_1606_11_71 75399 75842 - 4.A.6.1.16
Gene ID: HRGMv2_1606_11_64
Type: CAZyme
Location: 69151 - 70320 (-)
Gene ID: HRGMv2_1606_11_65
Type: STP
Location: 70439 - 71605 (-)
Gene ID: HRGMv2_1606_11_66
Type: TF
Location: 71720 - 72451 (-)
Gene ID: HRGMv2_1606_11_67
Type: TC
Location: 72636 - 73718 (-)
Gene ID: HRGMv2_1606_11_68
Type: TC
Location: 73708 - 74508 (-)
Gene ID: HRGMv2_1606_11_69
Type: TC
Location: 74599 - 75081 (-)
Gene ID: HRGMv2_1606_11_70
Type: pfam
Location: 75118 - 75399 (-)
Gene ID: HRGMv2_1606_11_71
Type: TC
Location: 75399 - 75842 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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