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Cluster: HRGMv2_1606_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1606_11 HRGMv2_1606_11_31 36451 36789 - 4.A.3.1.2
TF HRGMv2_1606_11 HRGMv2_1606_11_32 37003 38007 - LacI
TC HRGMv2_1606_11 HRGMv2_1606_11_33 38364 40136 + 4.A.3.1.1
CAZyme HRGMv2_1606_11 HRGMv2_1606_11_34 40203 41642 + GH1
TF HRGMv2_1606_11 HRGMv2_1606_11_35 41915 42952 - LacI
CAZyme HRGMv2_1606_11 HRGMv2_1606_11_36 43294 44736 + GH1
TC HRGMv2_1606_11 HRGMv2_1606_11_37 44913 46673 + 4.A.3.1.1
pfam HRGMv2_1606_11 HRGMv2_1606_11_38 46895 48013 + Transposase_mut
TF HRGMv2_1606_11 HRGMv2_1606_11_39 48369 49379 - LacI
TC HRGMv2_1606_11 HRGMv2_1606_11_40 49655 51433 + 4.A.3.1.1
CAZyme HRGMv2_1606_11 HRGMv2_1606_11_41 51509 52930 + GH1
Gene ID: HRGMv2_1606_11_31
Type: TC
Location: 36451 - 36789 (-)
Gene ID: HRGMv2_1606_11_32
Type: TF
Location: 37003 - 38007 (-)
Gene ID: HRGMv2_1606_11_33
Type: TC
Location: 38364 - 40136 (+)
Gene ID: HRGMv2_1606_11_34
Type: CAZyme
Location: 40203 - 41642 (+)
Gene ID: HRGMv2_1606_11_35
Type: TF
Location: 41915 - 42952 (-)
Gene ID: HRGMv2_1606_11_36
Type: CAZyme
Location: 43294 - 44736 (+)
Gene ID: HRGMv2_1606_11_37
Type: TC
Location: 44913 - 46673 (+)
Gene ID: HRGMv2_1606_11_38
Type: pfam
Location: 46895 - 48013 (+)
Gene ID: HRGMv2_1606_11_39
Type: TF
Location: 48369 - 49379 (-)
Gene ID: HRGMv2_1606_11_40
Type: TC
Location: 49655 - 51433 (+)
Gene ID: HRGMv2_1606_11_41
Type: CAZyme
Location: 51509 - 52930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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