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Cluster: HRGMv2_1606_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1606_9 HRGMv2_1606_9_61 72887 74353 - 2.A.66.2.23
pfam HRGMv2_1606_9 HRGMv2_1606_9_62 74438 75385 - ATPgrasp_TupA
pfam HRGMv2_1606_9 HRGMv2_1606_9_63 75529 76617 - EpsG
CAZyme HRGMv2_1606_9 HRGMv2_1606_9_64 76614 77717 - GT4
pfam HRGMv2_1606_9 HRGMv2_1606_9_65 77714 78661 - C5-epim_C
CAZyme HRGMv2_1606_9 HRGMv2_1606_9_66 78661 79953 - GT4
pfam HRGMv2_1606_9 HRGMv2_1606_9_67 79959 81230 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1606_9 HRGMv2_1606_9_68 81274 82191 - GT2
TC HRGMv2_1606_9 HRGMv2_1606_9_69 82195 82959 - 9.B.18.1.2
Gene ID: HRGMv2_1606_9_61
Type: TC
Location: 72887 - 74353 (-)
Gene ID: HRGMv2_1606_9_62
Type: pfam
Location: 74438 - 75385 (-)
Gene ID: HRGMv2_1606_9_63
Type: pfam
Location: 75529 - 76617 (-)
Gene ID: HRGMv2_1606_9_64
Type: CAZyme
Location: 76614 - 77717 (-)
Gene ID: HRGMv2_1606_9_65
Type: pfam
Location: 77714 - 78661 (-)
Gene ID: HRGMv2_1606_9_66
Type: CAZyme
Location: 78661 - 79953 (-)
Gene ID: HRGMv2_1606_9_67
Type: pfam
Location: 79959 - 81230 (-)
Gene ID: HRGMv2_1606_9_68
Type: CAZyme
Location: 81274 - 82191 (-)
Gene ID: HRGMv2_1606_9_69
Type: TC
Location: 82195 - 82959 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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