dbCAN Logo

Cluster: HRGMv2_1606_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1606_32 HRGMv2_1606_32_1 397 1710 - GH140
TC HRGMv2_1606_32 HRGMv2_1606_32_2 1921 3348 - 4.A.1.2.11
peptidase HRGMv2_1606_32 HRGMv2_1606_32_3 3839 5176 + S09.UPW
pfam HRGMv2_1606_32 HRGMv2_1606_32_4 5442 6953 + Sde182_NH-like
CAZyme HRGMv2_1606_32 HRGMv2_1606_32_5 7536 8966 - GH1
pfam HRGMv2_1606_32 HRGMv2_1606_32_6 9577 10221 - DUF4867
peptidase HRGMv2_1606_32 HRGMv2_1606_32_7 10349 11329 - S09.UPW
TC HRGMv2_1606_32 HRGMv2_1606_32_8 11434 12804 - 4.A.1.2.6
Gene ID: HRGMv2_1606_32_1
Type: CAZyme
Location: 397 - 1710 (-)
Gene ID: HRGMv2_1606_32_2
Type: TC
Location: 1921 - 3348 (-)
Gene ID: HRGMv2_1606_32_3
Type: peptidase
Location: 3839 - 5176 (+)
Gene ID: HRGMv2_1606_32_4
Type: pfam
Location: 5442 - 6953 (+)
Gene ID: HRGMv2_1606_32_5
Type: CAZyme
Location: 7536 - 8966 (-)
Gene ID: HRGMv2_1606_32_6
Type: pfam
Location: 9577 - 10221 (-)
Gene ID: HRGMv2_1606_32_7
Type: peptidase
Location: 10349 - 11329 (-)
Gene ID: HRGMv2_1606_32_8
Type: TC
Location: 11434 - 12804 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List