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Cluster: HRGMv2_1606_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1606_31 HRGMv2_1606_31_9 11816 14158 - 3.A.3.5.15
STP HRGMv2_1606_31 HRGMv2_1606_31_10 14573 16657 - Pkinase
STP HRGMv2_1606_31 HRGMv2_1606_31_11 16829 17791 - FHA
TC HRGMv2_1606_31 HRGMv2_1606_31_12 18389 20647 + 1.I.1.1.3
TC HRGMv2_1606_31 HRGMv2_1606_31_13 21093 21605 + 4.A.1.2.5
pfam HRGMv2_1606_31 HRGMv2_1606_31_14 21612 22478 + PRD | PRD | CAT_RBD
TC HRGMv2_1606_31 HRGMv2_1606_31_15 22578 24194 + 4.A.1.1.3
CAZyme HRGMv2_1606_31 HRGMv2_1606_31_16 24198 25580 + GH4
Gene ID: HRGMv2_1606_31_9
Type: TC
Location: 11816 - 14158 (-)
Gene ID: HRGMv2_1606_31_10
Type: STP
Location: 14573 - 16657 (-)
Gene ID: HRGMv2_1606_31_11
Type: STP
Location: 16829 - 17791 (-)
Gene ID: HRGMv2_1606_31_12
Type: TC
Location: 18389 - 20647 (+)
Gene ID: HRGMv2_1606_31_13
Type: TC
Location: 21093 - 21605 (+)
Gene ID: HRGMv2_1606_31_14
Type: pfam
Location: 21612 - 22478 (+)
Gene ID: HRGMv2_1606_31_15
Type: TC
Location: 22578 - 24194 (+)
Gene ID: HRGMv2_1606_31_16
Type: CAZyme
Location: 24198 - 25580 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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