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Cluster: HRGMv2_1606_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1606_28 HRGMv2_1606_28_4 4177 5682 + GH77
CAZyme HRGMv2_1606_28 HRGMv2_1606_28_5 5812 8079 + GT35
TC HRGMv2_1606_28 HRGMv2_1606_28_6 8536 9735 - 3.A.1.1.22
TC HRGMv2_1606_28 HRGMv2_1606_28_7 9804 10643 - 3.A.1.1.45
TC HRGMv2_1606_28 HRGMv2_1606_28_8 10643 11497 - 3.A.1.1.45
TC HRGMv2_1606_28 HRGMv2_1606_28_9 11585 12901 - 3.A.1.1.45
TF HRGMv2_1606_28 HRGMv2_1606_28_10 13208 13927 - GntR
NULL(UNKNOWN) HRGMv2_1606_28 HRGMv2_1606_28_11 14011 14130 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1606_28 HRGMv2_1606_28_12 14152 16602 + 4.A.1.1.8
Gene ID: HRGMv2_1606_28_4
Type: CAZyme
Location: 4177 - 5682 (+)
Gene ID: HRGMv2_1606_28_5
Type: CAZyme
Location: 5812 - 8079 (+)
Gene ID: HRGMv2_1606_28_6
Type: TC
Location: 8536 - 9735 (-)
Gene ID: HRGMv2_1606_28_7
Type: TC
Location: 9804 - 10643 (-)
Gene ID: HRGMv2_1606_28_8
Type: TC
Location: 10643 - 11497 (-)
Gene ID: HRGMv2_1606_28_9
Type: TC
Location: 11585 - 12901 (-)
Gene ID: HRGMv2_1606_28_10
Type: TF
Location: 13208 - 13927 (-)
Gene ID: HRGMv2_1606_28_11
Type:
Location: 14011 - 14130 (-)
Gene ID: HRGMv2_1606_28_12
Type: TC
Location: 14152 - 16602 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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