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Cluster: HRGMv2_1606_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1606_25 HRGMv2_1606_25_6 5344 8112 - 3.A.3.4.1
STP HRGMv2_1606_25 HRGMv2_1606_25_7 8549 9229 + Pribosyltran
TF HRGMv2_1606_25 HRGMv2_1606_25_8 9626 10480 - HTH_6
CAZyme HRGMv2_1606_25 HRGMv2_1606_25_9 10523 13090 - GH106
TF HRGMv2_1606_25 HRGMv2_1606_25_10 13207 14214 + HTH_AraC
CAZyme HRGMv2_1606_25 HRGMv2_1606_25_11 14387 15835 + GH1
pfam HRGMv2_1606_25 HRGMv2_1606_25_12 16065 16910 + Hydrolase_3
TC HRGMv2_1606_25 HRGMv2_1606_25_13 17051 17587 + 4.A.1.2.6
Gene ID: HRGMv2_1606_25_6
Type: TC
Location: 5344 - 8112 (-)
Gene ID: HRGMv2_1606_25_7
Type: STP
Location: 8549 - 9229 (+)
Gene ID: HRGMv2_1606_25_8
Type: TF
Location: 9626 - 10480 (-)
Gene ID: HRGMv2_1606_25_9
Type: CAZyme
Location: 10523 - 13090 (-)
Gene ID: HRGMv2_1606_25_10
Type: TF
Location: 13207 - 14214 (+)
Gene ID: HRGMv2_1606_25_11
Type: CAZyme
Location: 14387 - 15835 (+)
Gene ID: HRGMv2_1606_25_12
Type: pfam
Location: 16065 - 16910 (+)
Gene ID: HRGMv2_1606_25_13
Type: TC
Location: 17051 - 17587 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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