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Cluster: HRGMv2_1605_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1605_44 HRGMv2_1605_44_3 2418 4871 - 4.A.1.1.8
TF HRGMv2_1605_44 HRGMv2_1605_44_4 5099 5818 + GntR
TC HRGMv2_1605_44 HRGMv2_1605_44_5 6125 7441 + 3.A.1.1.45
TC HRGMv2_1605_44 HRGMv2_1605_44_6 7529 8383 + 3.A.1.1.45
TC HRGMv2_1605_44 HRGMv2_1605_44_7 8383 9222 + 3.A.1.1.45
TC HRGMv2_1605_44 HRGMv2_1605_44_8 9291 10490 + 3.A.1.1.22
CAZyme HRGMv2_1605_44 HRGMv2_1605_44_9 11106 13373 - GT35
CAZyme HRGMv2_1605_44 HRGMv2_1605_44_10 13502 14491 - GH77
Gene ID: HRGMv2_1605_44_3
Type: TC
Location: 2418 - 4871 (-)
Gene ID: HRGMv2_1605_44_4
Type: TF
Location: 5099 - 5818 (+)
Gene ID: HRGMv2_1605_44_5
Type: TC
Location: 6125 - 7441 (+)
Gene ID: HRGMv2_1605_44_6
Type: TC
Location: 7529 - 8383 (+)
Gene ID: HRGMv2_1605_44_7
Type: TC
Location: 8383 - 9222 (+)
Gene ID: HRGMv2_1605_44_8
Type: TC
Location: 9291 - 10490 (+)
Gene ID: HRGMv2_1605_44_9
Type: CAZyme
Location: 11106 - 13373 (-)
Gene ID: HRGMv2_1605_44_10
Type: CAZyme
Location: 13502 - 14491 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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