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Cluster: HRGMv2_1604_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1604_3 HRGMv2_1604_3_9 12493 14742 + 2.A.66.4.4
pfam HRGMv2_1604_3 HRGMv2_1604_3_10 14749 16689 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1604_3 HRGMv2_1604_3_11 17052 18665 + 3.A.1.5.27
TC HRGMv2_1604_3 HRGMv2_1604_3_12 18821 19777 + 3.A.1.5.38
TC HRGMv2_1604_3 HRGMv2_1604_3_13 19781 21796 + 3.A.1.5.25
TC HRGMv2_1604_3 HRGMv2_1604_3_14 21797 22624 + 3.A.1.5.27
CAZyme HRGMv2_1604_3 HRGMv2_1604_3_15 22756 23682 + CE7
Gene ID: HRGMv2_1604_3_9
Type: TC
Location: 12493 - 14742 (+)
Gene ID: HRGMv2_1604_3_10
Type: pfam
Location: 14749 - 16689 (+)
Gene ID: HRGMv2_1604_3_11
Type: TC
Location: 17052 - 18665 (+)
Gene ID: HRGMv2_1604_3_12
Type: TC
Location: 18821 - 19777 (+)
Gene ID: HRGMv2_1604_3_13
Type: TC
Location: 19781 - 21796 (+)
Gene ID: HRGMv2_1604_3_14
Type: TC
Location: 21797 - 22624 (+)
Gene ID: HRGMv2_1604_3_15
Type: CAZyme
Location: 22756 - 23682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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