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Cluster: HRGMv2_1602_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1602_8 HRGMv2_1602_8_28 35529 37205 + 3.A.1.5.35
TC HRGMv2_1602_8 HRGMv2_1602_8_29 37362 38399 + 3.A.1.5.37
TC HRGMv2_1602_8 HRGMv2_1602_8_30 38414 39349 + 3.A.1.5.11
TC HRGMv2_1602_8 HRGMv2_1602_8_31 39352 40443 + 3.A.1.5.34
TC HRGMv2_1602_8 HRGMv2_1602_8_32 40443 41471 + 3.A.1.5.36
STP HRGMv2_1602_8 HRGMv2_1602_8_33 42211 44556 + GAF | SpoIIE
STP HRGMv2_1602_8 HRGMv2_1602_8_34 44635 45381 + STAS
CAZyme HRGMv2_1602_8 HRGMv2_1602_8_35 45967 47700 + GH13_30
Gene ID: HRGMv2_1602_8_28
Type: TC
Location: 35529 - 37205 (+)
Gene ID: HRGMv2_1602_8_29
Type: TC
Location: 37362 - 38399 (+)
Gene ID: HRGMv2_1602_8_30
Type: TC
Location: 38414 - 39349 (+)
Gene ID: HRGMv2_1602_8_31
Type: TC
Location: 39352 - 40443 (+)
Gene ID: HRGMv2_1602_8_32
Type: TC
Location: 40443 - 41471 (+)
Gene ID: HRGMv2_1602_8_33
Type: STP
Location: 42211 - 44556 (+)
Gene ID: HRGMv2_1602_8_34
Type: STP
Location: 44635 - 45381 (+)
Gene ID: HRGMv2_1602_8_35
Type: CAZyme
Location: 45967 - 47700 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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