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Cluster: HRGMv2_1602_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1602_6 HRGMv2_1602_6_32 40262 42511 + 1.I.1.1.3
STP HRGMv2_1602_6 HRGMv2_1602_6_33 43133 43894 + Fer4
TC HRGMv2_1602_6 HRGMv2_1602_6_34 44238 44750 + 4.A.1.2.5
pfam HRGMv2_1602_6 HRGMv2_1602_6_35 44769 45623 + PRD | PRD | CAT_RBD
TC HRGMv2_1602_6 HRGMv2_1602_6_36 45723 47339 + 4.A.1.1.3
CAZyme HRGMv2_1602_6 HRGMv2_1602_6_37 47343 48725 + GH4
Gene ID: HRGMv2_1602_6_32
Type: TC
Location: 40262 - 42511 (+)
Gene ID: HRGMv2_1602_6_33
Type: STP
Location: 43133 - 43894 (+)
Gene ID: HRGMv2_1602_6_34
Type: TC
Location: 44238 - 44750 (+)
Gene ID: HRGMv2_1602_6_35
Type: pfam
Location: 44769 - 45623 (+)
Gene ID: HRGMv2_1602_6_36
Type: TC
Location: 45723 - 47339 (+)
Gene ID: HRGMv2_1602_6_37
Type: CAZyme
Location: 47343 - 48725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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