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Cluster: HRGMv2_1602_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1602_17 HRGMv2_1602_17_13 12032 12475 + 4.A.6.1.16
pfam HRGMv2_1602_17 HRGMv2_1602_17_14 12475 12756 + YajC
TC HRGMv2_1602_17 HRGMv2_1602_17_15 12793 13275 + 4.A.6.1.4
TC HRGMv2_1602_17 HRGMv2_1602_17_16 13366 14166 + 4.A.6.1.4
TC HRGMv2_1602_17 HRGMv2_1602_17_17 14156 15238 + 4.A.6.1.4
TF HRGMv2_1602_17 HRGMv2_1602_17_18 15424 16155 + GntR
STP HRGMv2_1602_17 HRGMv2_1602_17_19 16270 17436 + SIS | SIS
CAZyme HRGMv2_1602_17 HRGMv2_1602_17_20 17556 18725 + CE9
Gene ID: HRGMv2_1602_17_13
Type: TC
Location: 12032 - 12475 (+)
Gene ID: HRGMv2_1602_17_14
Type: pfam
Location: 12475 - 12756 (+)
Gene ID: HRGMv2_1602_17_15
Type: TC
Location: 12793 - 13275 (+)
Gene ID: HRGMv2_1602_17_16
Type: TC
Location: 13366 - 14166 (+)
Gene ID: HRGMv2_1602_17_17
Type: TC
Location: 14156 - 15238 (+)
Gene ID: HRGMv2_1602_17_18
Type: TF
Location: 15424 - 16155 (+)
Gene ID: HRGMv2_1602_17_19
Type: STP
Location: 16270 - 17436 (+)
Gene ID: HRGMv2_1602_17_20
Type: CAZyme
Location: 17556 - 18725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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