dbCAN Logo

Cluster: HRGMv2_1602_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1602_12 HRGMv2_1602_12_11 14659 17076 - 4.A.1.1.8
TF HRGMv2_1602_12 HRGMv2_1602_12_12 17339 18058 + GntR
TC HRGMv2_1602_12 HRGMv2_1602_12_13 18365 19681 + 3.A.1.1.45
TC HRGMv2_1602_12 HRGMv2_1602_12_14 19769 20623 + 3.A.1.1.45
TC HRGMv2_1602_12 HRGMv2_1602_12_15 20623 21462 + 3.A.1.1.45
TC HRGMv2_1602_12 HRGMv2_1602_12_16 21531 22730 + 3.A.1.1.22
CAZyme HRGMv2_1602_12 HRGMv2_1602_12_17 23186 25453 - GT35
CAZyme HRGMv2_1602_12 HRGMv2_1602_12_18 25583 27088 - GH77
Gene ID: HRGMv2_1602_12_11
Type: TC
Location: 14659 - 17076 (-)
Gene ID: HRGMv2_1602_12_12
Type: TF
Location: 17339 - 18058 (+)
Gene ID: HRGMv2_1602_12_13
Type: TC
Location: 18365 - 19681 (+)
Gene ID: HRGMv2_1602_12_14
Type: TC
Location: 19769 - 20623 (+)
Gene ID: HRGMv2_1602_12_15
Type: TC
Location: 20623 - 21462 (+)
Gene ID: HRGMv2_1602_12_16
Type: TC
Location: 21531 - 22730 (+)
Gene ID: HRGMv2_1602_12_17
Type: CAZyme
Location: 23186 - 25453 (-)
Gene ID: HRGMv2_1602_12_18
Type: CAZyme
Location: 25583 - 27088 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List