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Cluster: HRGMv2_1601_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1601_1 HRGMv2_1601_1_201 228829 229623 - 3.A.1.34.1
TC HRGMv2_1601_1 HRGMv2_1601_1_202 229616 230539 - 3.A.1.34.1
TC HRGMv2_1601_1 HRGMv2_1601_1_203 230743 231723 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1601_1 HRGMv2_1601_1_204 231831 232655 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1601_1 HRGMv2_1601_1_205 232914 234317 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1601_1 HRGMv2_1601_1_206 234498 235061 - 4.A.1.2.6
peptidase HRGMv2_1601_1 HRGMv2_1601_1_207 235305 236204 + S09.UPW
TC HRGMv2_1601_1 HRGMv2_1601_1_208 236678 239035 + 9.A.8.1.6
pfam HRGMv2_1601_1 HRGMv2_1601_1_209 239130 239609 + tRNA_edit
TC HRGMv2_1601_1 HRGMv2_1601_1_210 239713 240909 + 2.A.1.2.18
CAZyme HRGMv2_1601_1 HRGMv2_1601_1_211 241063 242439 + GH13_20
Gene ID: HRGMv2_1601_1_201
Type: TC
Location: 228829 - 229623 (-)
Gene ID: HRGMv2_1601_1_202
Type: TC
Location: 229616 - 230539 (-)
Gene ID: HRGMv2_1601_1_203
Type: TC
Location: 230743 - 231723 (-)
Gene ID: HRGMv2_1601_1_204
Type:
Location: 231831 - 232655 (-)
Gene ID: HRGMv2_1601_1_205
Type: pfam
Location: 232914 - 234317 (-)
Gene ID: HRGMv2_1601_1_206
Type: TC
Location: 234498 - 235061 (-)
Gene ID: HRGMv2_1601_1_207
Type: peptidase
Location: 235305 - 236204 (+)
Gene ID: HRGMv2_1601_1_208
Type: TC
Location: 236678 - 239035 (+)
Gene ID: HRGMv2_1601_1_209
Type: pfam
Location: 239130 - 239609 (+)
Gene ID: HRGMv2_1601_1_210
Type: TC
Location: 239713 - 240909 (+)
Gene ID: HRGMv2_1601_1_211
Type: CAZyme
Location: 241063 - 242439 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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