dbCAN Logo

Cluster: HRGMv2_1601_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1601_9 HRGMv2_1601_9_58 55191 56696 + GH77
CAZyme HRGMv2_1601_9 HRGMv2_1601_9_59 56825 59092 + GT35
TC HRGMv2_1601_9 HRGMv2_1601_9_60 59550 60749 - 3.A.1.1.22
TC HRGMv2_1601_9 HRGMv2_1601_9_61 60818 61657 - 3.A.1.1.45
TC HRGMv2_1601_9 HRGMv2_1601_9_62 61657 62511 - 3.A.1.1.45
TC HRGMv2_1601_9 HRGMv2_1601_9_63 62599 63915 - 3.A.1.1.45
TF HRGMv2_1601_9 HRGMv2_1601_9_64 64222 64941 - GntR
TC HRGMv2_1601_9 HRGMv2_1601_9_65 65171 67621 + 4.A.1.1.8
Gene ID: HRGMv2_1601_9_58
Type: CAZyme
Location: 55191 - 56696 (+)
Gene ID: HRGMv2_1601_9_59
Type: CAZyme
Location: 56825 - 59092 (+)
Gene ID: HRGMv2_1601_9_60
Type: TC
Location: 59550 - 60749 (-)
Gene ID: HRGMv2_1601_9_61
Type: TC
Location: 60818 - 61657 (-)
Gene ID: HRGMv2_1601_9_62
Type: TC
Location: 61657 - 62511 (-)
Gene ID: HRGMv2_1601_9_63
Type: TC
Location: 62599 - 63915 (-)
Gene ID: HRGMv2_1601_9_64
Type: TF
Location: 64222 - 64941 (-)
Gene ID: HRGMv2_1601_9_65
Type: TC
Location: 65171 - 67621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List