dbCAN Logo

Cluster: HRGMv2_1599_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1599_16 HRGMv2_1599_16_1 64 858 - 3.A.1.34.1
TC HRGMv2_1599_16 HRGMv2_1599_16_2 851 1774 - 3.A.1.34.1
TC HRGMv2_1599_16 HRGMv2_1599_16_3 1978 2958 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1599_16 HRGMv2_1599_16_4 3118 3906 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1599_16 HRGMv2_1599_16_5 4157 5560 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1599_16 HRGMv2_1599_16_6 5742 6305 - 4.A.1.2.6
peptidase HRGMv2_1599_16 HRGMv2_1599_16_7 6549 7448 + S09.UPW
TC HRGMv2_1599_16 HRGMv2_1599_16_8 7920 10280 + 9.A.8.1.6
TC HRGMv2_1599_16 HRGMv2_1599_16_9 10402 11598 + 2.A.1.2.18
CAZyme HRGMv2_1599_16 HRGMv2_1599_16_10 11752 13128 + GH13_20
Gene ID: HRGMv2_1599_16_1
Type: TC
Location: 64 - 858 (-)
Gene ID: HRGMv2_1599_16_2
Type: TC
Location: 851 - 1774 (-)
Gene ID: HRGMv2_1599_16_3
Type: TC
Location: 1978 - 2958 (-)
Gene ID: HRGMv2_1599_16_4
Type:
Location: 3118 - 3906 (-)
Gene ID: HRGMv2_1599_16_5
Type: pfam
Location: 4157 - 5560 (-)
Gene ID: HRGMv2_1599_16_6
Type: TC
Location: 5742 - 6305 (-)
Gene ID: HRGMv2_1599_16_7
Type: peptidase
Location: 6549 - 7448 (+)
Gene ID: HRGMv2_1599_16_8
Type: TC
Location: 7920 - 10280 (+)
Gene ID: HRGMv2_1599_16_9
Type: TC
Location: 10402 - 11598 (+)
Gene ID: HRGMv2_1599_16_10
Type: CAZyme
Location: 11752 - 13128 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List