dbCAN Logo

Cluster: HRGMv2_1599_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1599_15 HRGMv2_1599_15_1 2 676 - CE9
STP HRGMv2_1599_15 HRGMv2_1599_15_2 795 1961 - SIS | SIS
TF HRGMv2_1599_15 HRGMv2_1599_15_3 2076 2807 - GntR
TC HRGMv2_1599_15 HRGMv2_1599_15_4 2993 4075 - 4.A.6.1.4
TC HRGMv2_1599_15 HRGMv2_1599_15_5 4065 4865 - 4.A.6.1.4
TC HRGMv2_1599_15 HRGMv2_1599_15_6 4956 5438 - 4.A.6.1.4
pfam HRGMv2_1599_15 HRGMv2_1599_15_7 5475 5756 - YajC
TC HRGMv2_1599_15 HRGMv2_1599_15_8 5756 6199 - 4.A.6.1.16
Gene ID: HRGMv2_1599_15_1
Type: CAZyme
Location: 2 - 676 (-)
Gene ID: HRGMv2_1599_15_2
Type: STP
Location: 795 - 1961 (-)
Gene ID: HRGMv2_1599_15_3
Type: TF
Location: 2076 - 2807 (-)
Gene ID: HRGMv2_1599_15_4
Type: TC
Location: 2993 - 4075 (-)
Gene ID: HRGMv2_1599_15_5
Type: TC
Location: 4065 - 4865 (-)
Gene ID: HRGMv2_1599_15_6
Type: TC
Location: 4956 - 5438 (-)
Gene ID: HRGMv2_1599_15_7
Type: pfam
Location: 5475 - 5756 (-)
Gene ID: HRGMv2_1599_15_8
Type: TC
Location: 5756 - 6199 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List