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Cluster: HRGMv2_1599_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1599_7 HRGMv2_1599_7_20 18719 20224 + GH77
CAZyme HRGMv2_1599_7 HRGMv2_1599_7_21 20353 22620 + GT35
TC HRGMv2_1599_7 HRGMv2_1599_7_22 23077 24276 - 3.A.1.1.22
TC HRGMv2_1599_7 HRGMv2_1599_7_23 24345 25184 - 3.A.1.1.45
TC HRGMv2_1599_7 HRGMv2_1599_7_24 25184 26038 - 3.A.1.1.45
TC HRGMv2_1599_7 HRGMv2_1599_7_25 26127 27443 - 3.A.1.1.45
TF HRGMv2_1599_7 HRGMv2_1599_7_26 27750 28469 - GntR
TC HRGMv2_1599_7 HRGMv2_1599_7_27 28697 31147 + 4.A.1.1.8
Gene ID: HRGMv2_1599_7_20
Type: CAZyme
Location: 18719 - 20224 (+)
Gene ID: HRGMv2_1599_7_21
Type: CAZyme
Location: 20353 - 22620 (+)
Gene ID: HRGMv2_1599_7_22
Type: TC
Location: 23077 - 24276 (-)
Gene ID: HRGMv2_1599_7_23
Type: TC
Location: 24345 - 25184 (-)
Gene ID: HRGMv2_1599_7_24
Type: TC
Location: 25184 - 26038 (-)
Gene ID: HRGMv2_1599_7_25
Type: TC
Location: 26127 - 27443 (-)
Gene ID: HRGMv2_1599_7_26
Type: TF
Location: 27750 - 28469 (-)
Gene ID: HRGMv2_1599_7_27
Type: TC
Location: 28697 - 31147 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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