dbCAN Logo

Cluster: HRGMv2_1599_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1599_1 HRGMv2_1599_1_34 32884 33951 - GT4
pfam HRGMv2_1599_1 HRGMv2_1599_1_35 33944 34471 - Hexapep | Hexapep_2
pfam HRGMv2_1599_1 HRGMv2_1599_1_36 34476 35693 - Epimerase | Polysacc_synt_C
TC HRGMv2_1599_1 HRGMv2_1599_1_37 35695 36753 - 9.B.18.2.1
CAZyme HRGMv2_1599_1 HRGMv2_1599_1_38 36754 37455 - GT26
TC HRGMv2_1599_1 HRGMv2_1599_1_39 37530 38216 - 9.B.18.1.2
Gene ID: HRGMv2_1599_1_34
Type: CAZyme
Location: 32884 - 33951 (-)
Gene ID: HRGMv2_1599_1_35
Type: pfam
Location: 33944 - 34471 (-)
Gene ID: HRGMv2_1599_1_36
Type: pfam
Location: 34476 - 35693 (-)
Gene ID: HRGMv2_1599_1_37
Type: TC
Location: 35695 - 36753 (-)
Gene ID: HRGMv2_1599_1_38
Type: CAZyme
Location: 36754 - 37455 (-)
Gene ID: HRGMv2_1599_1_39
Type: TC
Location: 37530 - 38216 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1599_1_36 vegetarian > omnivore 1.36170 0.04542

🧭 Explore Read Mapping of CGC

← Back to Cluster List