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Cluster: HRGMv2_1597_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1597_3 HRGMv2_1597_3_118 126111 127532 - GH1
TC HRGMv2_1597_3 HRGMv2_1597_3_119 127609 129387 - 4.A.3.1.1
TF HRGMv2_1597_3 HRGMv2_1597_3_120 129672 130673 + LacI
TC HRGMv2_1597_3 HRGMv2_1597_3_121 130931 132691 - 4.A.3.1.1
CAZyme HRGMv2_1597_3 HRGMv2_1597_3_122 132868 134310 - GH1
TF HRGMv2_1597_3 HRGMv2_1597_3_123 134652 135689 + LacI
CAZyme HRGMv2_1597_3 HRGMv2_1597_3_124 135957 137396 - GH1
TC HRGMv2_1597_3 HRGMv2_1597_3_125 137463 139229 - 4.A.3.1.1
TF HRGMv2_1597_3 HRGMv2_1597_3_126 139587 140591 + LacI
TC HRGMv2_1597_3 HRGMv2_1597_3_127 140806 141144 + 4.A.3.1.2
Gene ID: HRGMv2_1597_3_118
Type: CAZyme
Location: 126111 - 127532 (-)
Gene ID: HRGMv2_1597_3_119
Type: TC
Location: 127609 - 129387 (-)
Gene ID: HRGMv2_1597_3_120
Type: TF
Location: 129672 - 130673 (+)
Gene ID: HRGMv2_1597_3_121
Type: TC
Location: 130931 - 132691 (-)
Gene ID: HRGMv2_1597_3_122
Type: CAZyme
Location: 132868 - 134310 (-)
Gene ID: HRGMv2_1597_3_123
Type: TF
Location: 134652 - 135689 (+)
Gene ID: HRGMv2_1597_3_124
Type: CAZyme
Location: 135957 - 137396 (-)
Gene ID: HRGMv2_1597_3_125
Type: TC
Location: 137463 - 139229 (-)
Gene ID: HRGMv2_1597_3_126
Type: TF
Location: 139587 - 140591 (+)
Gene ID: HRGMv2_1597_3_127
Type: TC
Location: 140806 - 141144 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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