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Cluster: HRGMv2_1597_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1597_3 HRGMv2_1597_3_99 110671 111114 + 4.A.6.1.16
pfam HRGMv2_1597_3 HRGMv2_1597_3_100 111114 111395 + YajC
TC HRGMv2_1597_3 HRGMv2_1597_3_101 111432 111914 + 4.A.6.1.4
TC HRGMv2_1597_3 HRGMv2_1597_3_102 112005 112805 + 4.A.6.1.4
TC HRGMv2_1597_3 HRGMv2_1597_3_103 112795 113877 + 4.A.6.1.4
TF HRGMv2_1597_3 HRGMv2_1597_3_104 114062 114793 + GntR
STP HRGMv2_1597_3 HRGMv2_1597_3_105 114908 116074 + SIS | SIS
CAZyme HRGMv2_1597_3 HRGMv2_1597_3_106 116193 117362 + CE9
Gene ID: HRGMv2_1597_3_99
Type: TC
Location: 110671 - 111114 (+)
Gene ID: HRGMv2_1597_3_100
Type: pfam
Location: 111114 - 111395 (+)
Gene ID: HRGMv2_1597_3_101
Type: TC
Location: 111432 - 111914 (+)
Gene ID: HRGMv2_1597_3_102
Type: TC
Location: 112005 - 112805 (+)
Gene ID: HRGMv2_1597_3_103
Type: TC
Location: 112795 - 113877 (+)
Gene ID: HRGMv2_1597_3_104
Type: TF
Location: 114062 - 114793 (+)
Gene ID: HRGMv2_1597_3_105
Type: STP
Location: 114908 - 116074 (+)
Gene ID: HRGMv2_1597_3_106
Type: CAZyme
Location: 116193 - 117362 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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