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Cluster: HRGMv2_1597_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1597_23 HRGMv2_1597_23_3 761 3100 - 3.A.3.5.15
TC HRGMv2_1597_23 HRGMv2_1597_23_4 3661 5907 + 1.I.1.1.3
STP HRGMv2_1597_23 HRGMv2_1597_23_5 6536 7297 + Fer4
TC HRGMv2_1597_23 HRGMv2_1597_23_6 7578 8090 + 4.A.1.2.5
pfam HRGMv2_1597_23 HRGMv2_1597_23_7 8109 8963 + PRD | PRD | CAT_RBD
TC HRGMv2_1597_23 HRGMv2_1597_23_8 9063 10679 + 4.A.1.1.3
CAZyme HRGMv2_1597_23 HRGMv2_1597_23_9 10683 12065 + GH4
Gene ID: HRGMv2_1597_23_3
Type: TC
Location: 761 - 3100 (-)
Gene ID: HRGMv2_1597_23_4
Type: TC
Location: 3661 - 5907 (+)
Gene ID: HRGMv2_1597_23_5
Type: STP
Location: 6536 - 7297 (+)
Gene ID: HRGMv2_1597_23_6
Type: TC
Location: 7578 - 8090 (+)
Gene ID: HRGMv2_1597_23_7
Type: pfam
Location: 8109 - 8963 (+)
Gene ID: HRGMv2_1597_23_8
Type: TC
Location: 9063 - 10679 (+)
Gene ID: HRGMv2_1597_23_9
Type: CAZyme
Location: 10683 - 12065 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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