dbCAN Logo

Cluster: HRGMv2_1597_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1597_16 HRGMv2_1597_16_13 15863 18313 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1597_16 HRGMv2_1597_16_14 18335 18454 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1597_16 HRGMv2_1597_16_15 18538 19257 + GntR
TC HRGMv2_1597_16 HRGMv2_1597_16_16 19564 20880 + 3.A.1.1.45
TC HRGMv2_1597_16 HRGMv2_1597_16_17 20968 21822 + 3.A.1.1.45
TC HRGMv2_1597_16 HRGMv2_1597_16_18 21822 22661 + 3.A.1.1.45
TC HRGMv2_1597_16 HRGMv2_1597_16_19 22730 23929 + 3.A.1.1.22
CAZyme HRGMv2_1597_16 HRGMv2_1597_16_20 24546 26813 - GT35
CAZyme HRGMv2_1597_16 HRGMv2_1597_16_21 26942 28447 - GH77
Gene ID: HRGMv2_1597_16_13
Type: TC
Location: 15863 - 18313 (-)
Gene ID: HRGMv2_1597_16_14
Type:
Location: 18335 - 18454 (+)
Gene ID: HRGMv2_1597_16_15
Type: TF
Location: 18538 - 19257 (+)
Gene ID: HRGMv2_1597_16_16
Type: TC
Location: 19564 - 20880 (+)
Gene ID: HRGMv2_1597_16_17
Type: TC
Location: 20968 - 21822 (+)
Gene ID: HRGMv2_1597_16_18
Type: TC
Location: 21822 - 22661 (+)
Gene ID: HRGMv2_1597_16_19
Type: TC
Location: 22730 - 23929 (+)
Gene ID: HRGMv2_1597_16_20
Type: CAZyme
Location: 24546 - 26813 (-)
Gene ID: HRGMv2_1597_16_21
Type: CAZyme
Location: 26942 - 28447 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List