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Cluster: HRGMv2_1597_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1597_8 HRGMv2_1597_8_37 45812 47239 + 4.A.1.2.11
CAZyme HRGMv2_1597_8 HRGMv2_1597_8_38 47450 48763 + GH140
TC HRGMv2_1597_8 HRGMv2_1597_8_39 48953 51721 - 3.A.3.4.1
STP HRGMv2_1597_8 HRGMv2_1597_8_40 52157 52837 + Pribosyltran
TF HRGMv2_1597_8 HRGMv2_1597_8_41 53234 54088 - HTH_6
CAZyme HRGMv2_1597_8 HRGMv2_1597_8_42 54255 56846 - GH106
TF HRGMv2_1597_8 HRGMv2_1597_8_43 56961 57953 + 0035607
CAZyme HRGMv2_1597_8 HRGMv2_1597_8_44 58121 59569 + GH1
TC HRGMv2_1597_8 HRGMv2_1597_8_45 59710 60246 + 4.A.1.2.6
Gene ID: HRGMv2_1597_8_37
Type: TC
Location: 45812 - 47239 (+)
Gene ID: HRGMv2_1597_8_38
Type: CAZyme
Location: 47450 - 48763 (+)
Gene ID: HRGMv2_1597_8_39
Type: TC
Location: 48953 - 51721 (-)
Gene ID: HRGMv2_1597_8_40
Type: STP
Location: 52157 - 52837 (+)
Gene ID: HRGMv2_1597_8_41
Type: TF
Location: 53234 - 54088 (-)
Gene ID: HRGMv2_1597_8_42
Type: CAZyme
Location: 54255 - 56846 (-)
Gene ID: HRGMv2_1597_8_43
Type: TF
Location: 56961 - 57953 (+)
Gene ID: HRGMv2_1597_8_44
Type: CAZyme
Location: 58121 - 59569 (+)
Gene ID: HRGMv2_1597_8_45
Type: TC
Location: 59710 - 60246 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1597_8_38 vegetarian > vegan 1.04612 0.03374

🧭 Explore Read Mapping of CGC

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