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Cluster: HRGMv2_1596_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1596_6 HRGMv2_1596_6_11 14709 17162 - 4.A.1.1.8
TF HRGMv2_1596_6 HRGMv2_1596_6_12 17390 18109 + GntR
TC HRGMv2_1596_6 HRGMv2_1596_6_13 18416 19732 + 3.A.1.1.45
TC HRGMv2_1596_6 HRGMv2_1596_6_14 19820 20674 + 3.A.1.1.45
TC HRGMv2_1596_6 HRGMv2_1596_6_15 20674 21513 + 3.A.1.1.45
TC HRGMv2_1596_6 HRGMv2_1596_6_16 21582 22781 + 3.A.1.1.22
CAZyme HRGMv2_1596_6 HRGMv2_1596_6_17 23316 25583 - GT35
CAZyme HRGMv2_1596_6 HRGMv2_1596_6_18 25713 27218 - GH77
Gene ID: HRGMv2_1596_6_11
Type: TC
Location: 14709 - 17162 (-)
Gene ID: HRGMv2_1596_6_12
Type: TF
Location: 17390 - 18109 (+)
Gene ID: HRGMv2_1596_6_13
Type: TC
Location: 18416 - 19732 (+)
Gene ID: HRGMv2_1596_6_14
Type: TC
Location: 19820 - 20674 (+)
Gene ID: HRGMv2_1596_6_15
Type: TC
Location: 20674 - 21513 (+)
Gene ID: HRGMv2_1596_6_16
Type: TC
Location: 21582 - 22781 (+)
Gene ID: HRGMv2_1596_6_17
Type: CAZyme
Location: 23316 - 25583 (-)
Gene ID: HRGMv2_1596_6_18
Type: CAZyme
Location: 25713 - 27218 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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