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Cluster: HRGMv2_1596_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1596_9 HRGMv2_1596_9_37 43452 45794 - 3.A.3.5.15
STP HRGMv2_1596_9 HRGMv2_1596_9_38 46363 48447 - Pkinase
STP HRGMv2_1596_9 HRGMv2_1596_9_39 48619 49581 - FHA
TC HRGMv2_1596_9 HRGMv2_1596_9_40 50181 52442 + 1.I.1.1.3
STP HRGMv2_1596_9 HRGMv2_1596_9_41 53067 53828 + Fer4
TC HRGMv2_1596_9 HRGMv2_1596_9_42 54172 54684 + 4.A.1.2.5
pfam HRGMv2_1596_9 HRGMv2_1596_9_43 54703 55557 + PRD | PRD | CAT_RBD
TC HRGMv2_1596_9 HRGMv2_1596_9_44 55657 57273 + 4.A.1.1.3
CAZyme HRGMv2_1596_9 HRGMv2_1596_9_45 57277 58659 + GH4
Gene ID: HRGMv2_1596_9_37
Type: TC
Location: 43452 - 45794 (-)
Gene ID: HRGMv2_1596_9_38
Type: STP
Location: 46363 - 48447 (-)
Gene ID: HRGMv2_1596_9_39
Type: STP
Location: 48619 - 49581 (-)
Gene ID: HRGMv2_1596_9_40
Type: TC
Location: 50181 - 52442 (+)
Gene ID: HRGMv2_1596_9_41
Type: STP
Location: 53067 - 53828 (+)
Gene ID: HRGMv2_1596_9_42
Type: TC
Location: 54172 - 54684 (+)
Gene ID: HRGMv2_1596_9_43
Type: pfam
Location: 54703 - 55557 (+)
Gene ID: HRGMv2_1596_9_44
Type: TC
Location: 55657 - 57273 (+)
Gene ID: HRGMv2_1596_9_45
Type: CAZyme
Location: 57277 - 58659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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