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Cluster: HRGMv2_1595_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1595_36 HRGMv2_1595_36_1 153 947 - 3.A.1.34.1
TC HRGMv2_1595_36 HRGMv2_1595_36_2 940 1863 - 3.A.1.34.1
TC HRGMv2_1595_36 HRGMv2_1595_36_3 2068 3048 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1595_36 HRGMv2_1595_36_4 3209 3994 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1595_36 HRGMv2_1595_36_5 4253 5656 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1595_36 HRGMv2_1595_36_6 5838 6479 - 4.A.1.2.6
peptidase HRGMv2_1595_36 HRGMv2_1595_36_7 6648 7547 + S09.UPW
NULL(UNKNOWN) HRGMv2_1595_36 HRGMv2_1595_36_8 7595 7915 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1595_36 HRGMv2_1595_36_9 8037 10397 + 9.A.8.1.6
TC HRGMv2_1595_36 HRGMv2_1595_36_10 10523 11719 + 2.A.1.2.18
CAZyme HRGMv2_1595_36 HRGMv2_1595_36_11 11874 13250 + GH13_20
Gene ID: HRGMv2_1595_36_1
Type: TC
Location: 153 - 947 (-)
Gene ID: HRGMv2_1595_36_2
Type: TC
Location: 940 - 1863 (-)
Gene ID: HRGMv2_1595_36_3
Type: TC
Location: 2068 - 3048 (-)
Gene ID: HRGMv2_1595_36_4
Type:
Location: 3209 - 3994 (-)
Gene ID: HRGMv2_1595_36_5
Type: pfam
Location: 4253 - 5656 (-)
Gene ID: HRGMv2_1595_36_6
Type: TC
Location: 5838 - 6479 (-)
Gene ID: HRGMv2_1595_36_7
Type: peptidase
Location: 6648 - 7547 (+)
Gene ID: HRGMv2_1595_36_8
Type:
Location: 7595 - 7915 (+)
Gene ID: HRGMv2_1595_36_9
Type: TC
Location: 8037 - 10397 (+)
Gene ID: HRGMv2_1595_36_10
Type: TC
Location: 10523 - 11719 (+)
Gene ID: HRGMv2_1595_36_11
Type: CAZyme
Location: 11874 - 13250 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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