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Cluster: HRGMv2_1595_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1595_31 HRGMv2_1595_31_2 410 2752 - 3.A.3.5.15
STP HRGMv2_1595_31 HRGMv2_1595_31_3 3244 5328 - Pkinase
STP HRGMv2_1595_31 HRGMv2_1595_31_4 5499 6461 - FHA
TC HRGMv2_1595_31 HRGMv2_1595_31_5 7052 9295 + 1.I.1.1.3
STP HRGMv2_1595_31 HRGMv2_1595_31_6 9921 10682 + Fer4
TC HRGMv2_1595_31 HRGMv2_1595_31_7 10961 11473 + 4.A.1.2.5
pfam HRGMv2_1595_31 HRGMv2_1595_31_8 11480 12346 + PRD | PRD | CAT_RBD
TC HRGMv2_1595_31 HRGMv2_1595_31_9 12446 14062 + 4.A.1.1.3
CAZyme HRGMv2_1595_31 HRGMv2_1595_31_10 14066 15448 + GH4
Gene ID: HRGMv2_1595_31_2
Type: TC
Location: 410 - 2752 (-)
Gene ID: HRGMv2_1595_31_3
Type: STP
Location: 3244 - 5328 (-)
Gene ID: HRGMv2_1595_31_4
Type: STP
Location: 5499 - 6461 (-)
Gene ID: HRGMv2_1595_31_5
Type: TC
Location: 7052 - 9295 (+)
Gene ID: HRGMv2_1595_31_6
Type: STP
Location: 9921 - 10682 (+)
Gene ID: HRGMv2_1595_31_7
Type: TC
Location: 10961 - 11473 (+)
Gene ID: HRGMv2_1595_31_8
Type: pfam
Location: 11480 - 12346 (+)
Gene ID: HRGMv2_1595_31_9
Type: TC
Location: 12446 - 14062 (+)
Gene ID: HRGMv2_1595_31_10
Type: CAZyme
Location: 14066 - 15448 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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