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Cluster: HRGMv2_1593_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1593_20 HRGMv2_1593_20_13 15370 17787 - 4.A.1.1.8
TF HRGMv2_1593_20 HRGMv2_1593_20_14 18050 18769 + GntR
TC HRGMv2_1593_20 HRGMv2_1593_20_15 19076 20392 + 3.A.1.1.45
TC HRGMv2_1593_20 HRGMv2_1593_20_16 20480 21334 + 3.A.1.1.45
TC HRGMv2_1593_20 HRGMv2_1593_20_17 21334 22173 + 3.A.1.1.45
TC HRGMv2_1593_20 HRGMv2_1593_20_18 22241 23440 + 3.A.1.1.22
CAZyme HRGMv2_1593_20 HRGMv2_1593_20_19 23975 26242 - GT35
CAZyme HRGMv2_1593_20 HRGMv2_1593_20_20 26371 27876 - GH77
Gene ID: HRGMv2_1593_20_13
Type: TC
Location: 15370 - 17787 (-)
Gene ID: HRGMv2_1593_20_14
Type: TF
Location: 18050 - 18769 (+)
Gene ID: HRGMv2_1593_20_15
Type: TC
Location: 19076 - 20392 (+)
Gene ID: HRGMv2_1593_20_16
Type: TC
Location: 20480 - 21334 (+)
Gene ID: HRGMv2_1593_20_17
Type: TC
Location: 21334 - 22173 (+)
Gene ID: HRGMv2_1593_20_18
Type: TC
Location: 22241 - 23440 (+)
Gene ID: HRGMv2_1593_20_19
Type: CAZyme
Location: 23975 - 26242 (-)
Gene ID: HRGMv2_1593_20_20
Type: CAZyme
Location: 26371 - 27876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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