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Cluster: HRGMv2_1593_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1593_19 HRGMv2_1593_19_9 7884 9197 - GH140
TC HRGMv2_1593_19 HRGMv2_1593_19_10 9406 10833 - 4.A.1.2.11
peptidase HRGMv2_1593_19 HRGMv2_1593_19_11 11324 12661 + S09.UPW
pfam HRGMv2_1593_19 HRGMv2_1593_19_12 12924 14435 + Sde182_NH-like
CAZyme HRGMv2_1593_19 HRGMv2_1593_19_13 14738 16168 - GH1
pfam HRGMv2_1593_19 HRGMv2_1593_19_14 16514 17158 - DUF4867
peptidase HRGMv2_1593_19 HRGMv2_1593_19_15 17282 18262 - S09.UPC
TC HRGMv2_1593_19 HRGMv2_1593_19_16 18368 19738 - 4.A.1.2.6
Gene ID: HRGMv2_1593_19_9
Type: CAZyme
Location: 7884 - 9197 (-)
Gene ID: HRGMv2_1593_19_10
Type: TC
Location: 9406 - 10833 (-)
Gene ID: HRGMv2_1593_19_11
Type: peptidase
Location: 11324 - 12661 (+)
Gene ID: HRGMv2_1593_19_12
Type: pfam
Location: 12924 - 14435 (+)
Gene ID: HRGMv2_1593_19_13
Type: CAZyme
Location: 14738 - 16168 (-)
Gene ID: HRGMv2_1593_19_14
Type: pfam
Location: 16514 - 17158 (-)
Gene ID: HRGMv2_1593_19_15
Type: peptidase
Location: 17282 - 18262 (-)
Gene ID: HRGMv2_1593_19_16
Type: TC
Location: 18368 - 19738 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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