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Cluster: HRGMv2_1591_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1591_10 HRGMv2_1591_10_11 15192 17642 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1591_10 HRGMv2_1591_10_12 17664 17783 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1591_10 HRGMv2_1591_10_13 17867 18586 + GntR
TC HRGMv2_1591_10 HRGMv2_1591_10_14 18893 20209 + 3.A.1.1.45
TC HRGMv2_1591_10 HRGMv2_1591_10_15 20297 21151 + 3.A.1.1.45
TC HRGMv2_1591_10 HRGMv2_1591_10_16 21151 21990 + 3.A.1.1.45
TC HRGMv2_1591_10 HRGMv2_1591_10_17 22059 23258 + 3.A.1.1.22
CAZyme HRGMv2_1591_10 HRGMv2_1591_10_18 23714 25981 - GT35
CAZyme HRGMv2_1591_10 HRGMv2_1591_10_19 26110 27615 - GH77
Gene ID: HRGMv2_1591_10_11
Type: TC
Location: 15192 - 17642 (-)
Gene ID: HRGMv2_1591_10_12
Type:
Location: 17664 - 17783 (+)
Gene ID: HRGMv2_1591_10_13
Type: TF
Location: 17867 - 18586 (+)
Gene ID: HRGMv2_1591_10_14
Type: TC
Location: 18893 - 20209 (+)
Gene ID: HRGMv2_1591_10_15
Type: TC
Location: 20297 - 21151 (+)
Gene ID: HRGMv2_1591_10_16
Type: TC
Location: 21151 - 21990 (+)
Gene ID: HRGMv2_1591_10_17
Type: TC
Location: 22059 - 23258 (+)
Gene ID: HRGMv2_1591_10_18
Type: CAZyme
Location: 23714 - 25981 (-)
Gene ID: HRGMv2_1591_10_19
Type: CAZyme
Location: 26110 - 27615 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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